Conformational Epitope Prediction Server v1.0

Developed@ Bioinformatics Centre, University of Pune, INDIA

Bioinfo@UoP CE Server Help

Predicted Conformational Epitopes(CE) and Sequential Epitopes (SE)


Predicted CE
CE No AD within 6A of Reference AD Res within 6A of Ref AD
1 N_98: HIY :100
N_450: TEFLGQWDwPdGaKiEYfL :468
N_419: R
2 N_107: RIgEDSD :113
N_450: TEFLGQWDwPdGaKiEYfL :468
N_104: N
N_169: V
3 N_141: RgKHsNGtIHDRSQY :155
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_137: G
N_176: I
N_437: W
4 N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_141: RgKHsNGtIHDRSQY :155
N_219: ARN :221
N_258: KEgKILKWePlAGTaK :273
N_176: I
N_187: K
5 N_219: ARN :221
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_245: SATgPAE :251

6 N_245: SATgPAE :251
N_219: ARN :221
N_258: KEgKILKWePlAGTaK :273
N_342: PGNNNN :347
N_295: W
7 N_258: KEgKILKWePlAGTaK :273
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_245: SATgPAE :251
N_336: KCND :339
N_187: K
N_311: T
N_313: T
N_315: Q
8 N_336: KCND :339
N_258: KEgKILKWePlAGTaK :273
N_384: TDDKsKPTQ :392
N_315: Q
9 N_342: PGNNNN :347
N_245: SATgPAE :251
N_366: ISIAsR :371
N_295: W
N_296: Q
10 N_356: DGV :358
N_384: TDDKsKPTQ :392
N_304: R
N_381: N
11 N_366: ISIAsR :371
N_342: PGNNNN :347
N_399: LNTDW :403
N_432: K
12 N_384: TDDKsKPTQ :392
N_336: KCND :339
N_315: Q
N_330: D
N_332: T
N_333: V
N_381: N
N_394: G
13 N_399: LNTDW :403
N_366: ISIAsR :371
N_450: TEFLGQWDwPdGaKiEYfL :468

14 N_450: TEFLGQWDwPdGaKiEYfL :468
N_399: LNTDW :403
N_98: HIY :100
N_107: RIgEDSD :113
N_93: T
N_104: N
N_435: K
Predicted SE
1 N_284: RAE :286 N_88: T
N_89: K
N_306: D
N_308: V
2 N_412: DAEGE :416 N_89: K
N_419: R
3 N_162: PLSS :165 N_104: N
N_128: E
N_170: N
BS<=>CE

Note: Residues with accessibility less than 25% are shown in lower case


Antigenic Determinants

Predicted epitopes mapped on structure