Conformational Epitope Prediction Server v1.0

Developed@Bioinformatics Centre, University of Pune, INDIA

Bioinfo@UoP CE Server Help

Predicted Conformational Epitopes(CE) and Sequential Epitopes (SE)


Predicted CE
CE No AD within 6A of Reference AD Res within 6A of Ref AD
1 T_53: KaLKEDGD :60
T_161: YLiTPAWlW :169
T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_280: SlLHeFGLLESPKALEEaPWPPpEG :304
T_13: R
2 T_69: KAPsF :73
T_80: GYKAGRaPTPED :91

3 T_80: GYKAGRaPTPED :91
T_110: RlEVPGY :116
T_69: KAPsF :73
T_24: Y
T_94: R
T_97: A
T_101: E
4 T_110: RlEVPGY :116
T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_80: GYKAGRaPTPED :91

5 T_127: KKaEKEGYE :135
T_150: SDRiH :154
T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_13: R
6 T_150: SDRiH :154
T_127: KKaEKEGYE :135
T_161: YLiTPAWlW :169

7 T_161: YLiTPAWlW :169
T_150: SDRiH :154
T_53: KaLKEDGD :60
T_173: G
T_175: R
T_731: P
T_732: D
8 T_209: EEwGSL :214
T_218: LKNLDRLKP :226
T_178: Q
T_202: K
9 T_218: LKNLDRLKP :226
T_209: EEwGSL :214
T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_199: I
10 T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_110: RlEVPGY :116
T_127: KKaEKEGYE :135
T_218: LKNLDRLKP :226
T_280: SlLHeFGLLESPKALEEaPWPPpEG :304
T_53: KaLKEDGD :60
T_104: D
T_106: L
T_180: A
T_190: S
T_192: N
T_194: P
T_195: G
T_197: K
T_274: E
T_275: R
11 T_280: SlLHeFGLLESPKALEEaPWPPpEG :304
T_230: EKiLAHMDdLKLsWDlAKvRTDlPlEvDfAKRREPDRERlRA :271
T_53: KaLKEDGD :60
T_392: RRYGGEWTEE :401
T_417: WGRlE :421
T_106: L
T_274: E
T_277: E
T_328: R
T_331: R
T_334: R
T_344: D
T_346: K
T_347: E
T_404: E
T_414: A
12 T_361: LrEGLGlP :368
T_555: PRTG :558
T_339: Y
T_343: R
T_346: K
T_347: E
T_443: H
13 T_392: RRYGGEWTEE :401
T_280: SlLHeFGLLESPKALEEaPWPPpEG :304
T_323: A
T_388: E
T_404: E
14 T_417: WGRlE :421
T_280: SlLHeFGLLESPKALEEaPWPPpEG :304
T_414: A
T_424: E
T_431: R
15 T_450: RlDVAYlRAlSLEvAEeIARlEAEvFRLAGHPfALASAAqLER :492
T_495: FDELGLPAIGKTEKTGKRsTSAAVlEAlREAHP :527
T_540: KLKSTYIDPlPD :551
T_531: K
T_536: R
T_593: R
T_594: I
T_596: R
16 T_495: FDELGLPAIGKTEKTGKRsTSAAVlEAlREAHP :527
T_450: RlDVAYlRAlSLEvAEeIARlEAEvFRLAGHPfALASAAqLER :492
T_530: E
T_531: K
T_536: R
17 T_540: KLKSTYIDPlPD :551
T_450: RlDVAYlRAlSLEvAEeIARlEAEvFRLAGHPfALASAAqLER :492
T_583: NiPVRTPL :590
T_536: R
T_537: E
T_578: D
T_594: I
18 T_583: NiPVRTPL :590
T_540: KLKSTYIDPlPD :551
T_537: E
T_580: N
T_593: R
T_594: I
T_784: H
T_832: E
19 T_601: EEGWL :605
T_770: PRlEEMGaR :778
T_796: AEA :798
T_443: H
T_767: K
T_802: L
T_801: R
T_823: I
T_825: E
20 T_633: QEGRD :637
T_645: WmFGVPREAvDPLmRR :660
T_613: Q
T_630: R
T_816: P
21 T_645: WmFGVPREAvDPLmRR :660
T_633: QEGRD :637
T_680: QElAiPYEE :688
T_630: R
T_663: K
T_695: R
T_698: Q
22 T_680: QElAiPYEE :688
T_645: WmFGVPREAvDPLmRR :660
T_199: I
T_200: G
T_676: H
T_677: R
T_691: A
Predicted SE
1 T_736: RVKSV :740 T_732: D
T_743: A
2 T_312: SRK :314 T_318: W
T_320: D
T_578: D
3 T_28: HAlKGlTtSRGEP :40 T_24: Y
T_94: R
T_275: R
T_277: E
T_424: E
T_428: W
T_723: L
T_811: Y
BS<=>CE

Note: Residues with accessibility less than 25% are shown in lower case


Antigenic Determinants

Predicted epitopes mapped on structure