Conformational Epitope Prediction Server v1.0

Developed@Bioinformatics Centre, University of Pune, INDIA

Bioinfo@UoP CE Server Help

Predicted Conformational Epitopes(CE) and Sequential Epitopes (SE)


Predicted CE
CE No AD within 6A of Reference AD Res within 6A of Ref AD
1 N_81: IRD :83
N_126: PDE :128
N_187: K
2 N_98: HIY :100
N_412: DAEGECyR :419
N_450: TEFLGQW :456
N_396: T
3 N_126: PDE :128
N_81: IRD :83
N_412: DAEGECyR :419

4 N_141: RGKHsNGtIHDRSQY :155
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_137: G
N_176: I
N_437: W
5 N_162: PLSS :165
N_169: VNSRV :173

6 N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_141: RGKHsNGtIHDRSQY :155
N_219: ARN :221
N_258: KEgKILKWePlAGTaK :273
N_176: I
7 N_219: ARN :221
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_245: SATgPAE :251

8 N_245: SATgPAE :251
N_219: ARN :221
N_258: KEgKILKWePlAGTaK :273
N_342: PGNNNN :347
N_295: W
9 N_258: KEgKILKWePlAGTaK :273
N_195: SGPNNNaSaViWyNRRPVtEiN :216
N_245: SATgPAE :251
N_336: KCND :339
N_311: T
N_313: T
N_315: Q
10 N_328: PNDpTV :333
N_342: PGNNNN :347
N_384: TDDKsKPTQ :392
N_368: I
11 N_336: KCND :339
N_258: KEgKILKWePlAGTaK :273
N_384: TDDKsKPTQ :392
N_315: Q
12 N_342: PGNNNN :347
N_245: SATgPAE :251
N_328: PNDpTV :333
N_295: W
N_296: Q
13 N_356: DGV :358
N_384: TDDKsKPTQ :392
N_304: R
N_381: N
14 N_384: TDDKsKPTQ :392
N_328: PNDpTV :333
N_336: KCND :339
N_356: DGV :358
N_381: N
N_394: G
15 N_412: DAEGECyR :419
N_450: TEFLGQW :456
N_98: HIY :100
N_126: PDE :128
N_86: N
N_88: T
N_90: G
N_93: T
Predicted SE
1 N_107: RIgEDSD :113 N_104: N
N_463: K
N_466: Y
2 N_284: RAE :286 N_88: T
N_304: R
N_306: D
N_308: V
3 N_399: LNTDW :403 N_366: I
N_371: R
N_396: T
N_459: P
N_461: G
BS<=>CE

Note: Residues with accessibility less than 25% are shown in lower case


Antigenic Determinants

Predicted epitopes mapped on structure