Conformational Epitope Prediction Server v1.0

Developed@Bioinformatics Centre, University of Pune, INDIA

Bioinfo@UoP CE Server Help

Predicted Conformational Epitopes(CE) and Sequential Epitopes (SE)


Predicted CE
CE No AD within 6A of Reference AD Res within 6A of Ref AD
1 O_23: SLDEKNsVSvD :33
O_44: KEKNKDGKyD :53
O_57: TvDKlElKgTsDKNN :71
O_39: K
2 O_57: TvDKlElKgTsDKNN :71
O_23: SLDEKNsVSvD :33
O_44: KEKNKDGKyD :53
O_74: GVlEgVKADKcKvKlTiSDD :93
O_39: K
3 O_74: GVlEgVKADKcKvKlTiSDD :93
O_57: TvDKlElKgTsDKNN :71
O_103: KEDGK :107
O_110: VSKK :113
O_39: K
O_96: Q
4 O_103: KEDGK :107
O_117: KDKSsTEeKfNEKG :130
O_74: GVlEgVKADKcKvKlTiSDD :93

5 O_110: VSKK :113
O_117: KDKSsTEeKfNEKG :130
O_74: GVlEgVKADKcKvKlTiSDD :93

6 O_117: KDKSsTEeKfNEKG :130
O_140: ADGtR :144
O_148: TGiKSDGSgKaK :159
O_103: KEDGK :107
O_110: VSKK :113
O_36: G
O_96: Q
O_134: E
O_136: I
O_137: I
7 O_140: ADGtR :144
O_117: KDKSsTEeKfNEKG :130
O_163: KGyVlEgTlTAEK :175
O_236: VfTKEN :241
O_137: I
8 O_148: TGiKSDGSgKaK :159
O_117: KDKSsTEeKfNEKG :130
O_163: KGyVlEgTlTAEK :175
O_134: E
O_136: I
9 O_163: KGyVlEgTlTAEK :175
O_140: ADGtR :144
O_148: TGiKSDGSgKaK :159
O_179: VvKEGT :184
O_192: SKSGEVSvElNdTdSSAATKkTAAWNSGTS :221
O_236: VfTKEN :241
O_250: SNgTKLEGSAVEiTKLDEiKN :270

10 O_179: VvKEGT :184
O_163: KGyVlEgTlTAEK :175
O_192: SKSGEVSvElNdTdSSAATKkTAAWNSGTS :221
O_250: SNgTKLEGSAVEiTKLDEiKN :270
O_273: K
11 O_192: SKSGEVSvElNdTdSSAATKkTAAWNSGTS :221
O_163: KGyVlEgTlTAEK :175
O_179: VvKEGT :184
O_228: NSKKT :232
O_236: VfTKEN :241
O_273: K
12 O_228: NSKKT :232
O_192: SKSGEVSvElNdTdSSAATKkTAAWNSGTS :221
O_250: SNgTKLEGSAVEiTKLDEiKN :270

13 O_236: VfTKEN :241
O_140: ADGtR :144
O_163: KGyVlEgTlTAEK :175
O_192: SKSGEVSvElNdTdSSAATKkTAAWNSGTS :221
O_250: SNgTKLEGSAVEiTKLDEiKN :270

14 O_250: SNgTKLEGSAVEiTKLDEiKN :270
O_163: KGyVlEgTlTAEK :175
O_179: VvKEGT :184
O_228: NSKKT :232
O_236: VfTKEN :241
O_247: Q
O_273: K
BS<=>CE

No SE Predicted for this stricture

Note: Residues with accessibility less than 25% are shown in lower case


Antigenic Determinants

Predicted epitopes mapped on structure