ProtFract Facilities for Protein Interior Studies

Requirement: Uploaded file should be in PDB format. (If the file is in .pdb1 format, kindly change the extension to .pdb before submitting)



Note: ProtFract offers multifaceted information regarding fractal symmetry of protein interior. Hence results are presented in separate files to distinguish findings on different aspects.



ProtFract interior results include:

  • Mass fractal dimension(MFD) of the protein
  • Hydrophobic fractal dimension(HFD) of the protein
  • Polarizability fractal dimension(PFD) of the protein
  • Correlation dimension (CD) amongst peptide dipoles
  • Correlation dimension (CD) amongst aromatic amino acids
  • Correlation dimension (CD) amongst charged amino acids
  • Correlation dimension (CD) amongst active chiral centres
  • Correlation dimension (CD) between aromatic amino acids and positively charged amino acids
  • Correlation dimension (CD) amongst hydrophobic amino acids